C++

.gitignore

@@ -59,10 +59,10 @@ __pycache__/
 *.vtu
 
 # vscode
-c++/abpcpp/cpp-module/build/*
+c++/abpcpp/cppmodule/build/*
 
 # exception to the rule
-!c++/abpcpp/cpp-module/build/.gitkeep 
+!c++/abpcpp/cppmodule/build/.gitkeep 
 
 #ipython
 *.ipynb_checkpoints

c++/abpcpp/__init__.py

@@ -29,4 +29,5 @@
 
 from .cppmodule import *
 from .builder import *
+from .reader import *
 from .dumper import *

c++/abpcpp/builder/make_random.py

@@ -55,7 +55,7 @@ def random_init(phi, Lx, Ly = None, rcut = None, outfile = 'test.json', max_atte
       v = [0.0, 0.0]
       f = [0.0, 0.0]
       # Add a particle at position x,y with the director pointing in the random direction
-      particles.append({'id': i, 'r': r, 'n': n, 'v': v, 'f': f})
+      particles.append({'id': i, 'r': r, 'n': n, 'v': v, 'f': f, 'radius': 0.5*rcut})
   else:
     # Here we implement avoidance of overlaps 
     i = 0
@@ -74,7 +74,7 @@ def random_init(phi, Lx, Ly = None, rcut = None, outfile = 'test.json', max_atte
           v = [0.0, 0.0]
           f = [0.0, 0.0]
           # Add a particle at position x,y with the director pointing in the random direction
-          particles.append({'id': i, 'r': r, 'n': n, 'v': v, 'f': f})
+          particles.append({'id': i, 'r': r, 'n': n, 'v': v, 'f': f, 'radius': 0.5*rcut})
           i += 1
           break 
         else: