scverse / muon Star 262 Code Issues Pull requests Discussions muon is a multimodal omics Python framework muon scrna-seq multi-omics multimodal-data cite-seq scanpy scatac-seq anndata multimodal-omics-analysis mudata scverse Updated Jan 19, 2026 Python
scverse / mudata Star 105 Code Issues Pull requests Multimodal Data (.h5mu) implementation for Python genomics muon data-analysis multi-omics anndata multimodal-omics-analysis mudata scverse Updated Jan 26, 2026 Python
bioFAM / mofaflex Star 32 Code Issues Pull requests Discussions factor models for omics data bioinformatics single-cell factor-analysis multi-omics muvi mofa multimodal-omics-analysis Updated Jan 28, 2026 Python