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CIC Summerschool 2025 - Machine Learning Workshop

Machine Learning Workshop at CIC Summerschool 2025

Andrea Volkamer, Katharina Buchthal

Content

Session 1 - From molecular data to models

  • CADD, AI and ML
  • The importance of data quality for ML: Data preprocessing and analysis
  • Molecular representations: Fingerprints and similarities

Session 2 - Machine learning essentials

  • Introduction to ML
  • Supervised learning
  • Performance evaluation

Session 3 - Deep learning applications

  • Deep learning
  • Neural networks
  • More molecular encodings and architectures

Schedule

Date: 2025-09-29, 8:30 - 14:30

Time Topic Presenter
08:30-09:10 Lecture: From molecular data to models pdf Andrea Volkamer
09:10-10:00 Hands-on: Data Solution Katharina Buchthal
10:00-10:40 Lecture: Machine learning (ML) essentials pdf Andrea Volkamer
10:40-11:30 Hands-on: ML Solution Katharina Buchthal
11:30-12:30 Break
12:30-13:00 Hands-on: continued Katharina Buhcthal
13:00-13:40 Lecture: Deep learning (DL) basics pdf Andrea Volkamer
13:40-14:30 Hands-on: DL Katharina Buchthal

How to start using this material

  1. Click on one of the "Hands-on" links above
  2. Accept potential warnings about the origin of the notebooks.
  3. Follow the lesson by holding down the shift key and pressing "return"

Resources

This document contains a list of useful resources for learning more about AI in drug discovery.

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