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Pull requests: wwood/singlem

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Pull requests list

Strengthen supplement matched protein sequence ID test codex
#280 opened Jan 11, 2026 by wwood Loading…
2
Add tqdm progress bar for hmmsearch aggregation codex
#279 opened Jan 8, 2026 by wwood Loading…
Add zst (Zstandard) compression support for input files
#276 opened Dec 16, 2025 by Copilot AI • Draft
1
@wwood
bug-fix: stop codons not registered when parsing alignments for metap…
#274 opened Dec 12, 2025 by thepatientwait Loading…
The updated code according to the developer's advice, to fit eukaryotic plastid screening
#272 opened Dec 9, 2025 by Andyargueasae Loading…
Add prepare_genomes pipeline to lyrebird_metapackage_creation
#270 opened Dec 4, 2025 by rzhao-2 • Draft
build(deps): bump pip from 25.0.1 to 25.3 in /admin dependencies Pull requests that update a dependency file python Pull requests that update python code
#262 opened Nov 3, 2025 by dependabot bot Loading…
Add checkpoint filtering spkgs with excessive off-target sequences codex
#249 opened Sep 1, 2025 by wwood Loading…
Handle genome FASTA inputs as forward reads codex
#247 opened Aug 26, 2025 by wwood Loading…
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